IL_11HV_011

3D structure

PDB id

11HV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 60S ribosomal subunit with eEF2 domain IV open

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CACUCC*GCCCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HV|1|28|C|168
11HV|1|28|A|169
11HV|1|28|C|170
11HV|1|28|U|171
11HV|1|28|C|172
11HV|1|28|C|173
*
11HV|1|28|G|263
11HV|1|28|C|264
11HV|1|28|C|265
11HV|1|28|C|266
11HV|1|28|G|267

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 13

Large ribosomal subunit protein eL13

Chain 35

60S ribosomal protein L35