IL_11HV_022

3D structure

PDB id

11HV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 60S ribosomal subunit with eEF2 domain IV open

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

11HV|1|28|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HV|1|28|A|466
11HV|1|28|U|467
11HV|1|28|U|468
11HV|1|28|C|469
11HV|1|28|A|470
11HV|1|28|A|471
11HV|1|28|C|472
*
11HV|1|28|G|682
11HV|1|28|C|683
11HV|1|28|G|684
11HV|1|28|C|685
11HV|1|28|A|686
11HV|1|28|U|687
11HV|1|28|U|688
11HV|1|28|U|689

Current chains

Chain 28

28S rRNA

Nearby chains

Chain L6

Large ribosomal subunit protein eL6

Chain gg

60S ribosomal protein L28