IL_11HV_053
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 11HV|1|28|G|1625, 11HV|1|28|A|1637, 11HV|1|28|A|1638, 11HV|1|28|U|1639
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HV_053 not in the Motif Atlas
- Homologous match to IL_8GLP_062
- Geometric discrepancy: 0.0677
- The information below is about IL_8GLP_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.4
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
11HV|1|28|G|1624
11HV|1|28|G|1625
11HV|1|28|G|1626
*
11HV|1|28|U|1636
11HV|1|28|A|1637
11HV|1|28|A|1638
11HV|1|28|U|1639
11HV|1|28|C|1640
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 15
- 60S ribosomal protein L15
- Chain 17
- 60S ribosomal protein L17
- Chain 37
- 60S ribosomal protein L37
- Chain L8
- 60S ribosomal protein L8
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