IL_11HV_108
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCAAAGU*AAUGAAGC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HV_108 not in the Motif Atlas
- Homologous match to IL_8GLP_121
- Geometric discrepancy: 0.3423
- The information below is about IL_8GLP_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11HV|1|28|G|3714
11HV|1|28|U|3715
11HV|1|28|C|3716
11HV|1|28|A|3717
11HV|1|28|A|3718
11HV|1|28|A|3719
11HV|1|28|G|3720
11HV|1|28|U|3721
*
11HV|1|28|A|3732
11HV|1|28|A|3733
11HV|1|28|U|3734
11HV|1|28|G|3735
11HV|1|28|A|3736
11HV|1|28|A|3737
11HV|1|28|G|3738
11HV|1|28|C|3739
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 36
- 60S ribosomal protein L36
- Chain 42
- eL42
- Chain L8
- 60S ribosomal protein L8
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