IL_11HV_145
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCUCGGAUAGC*GUGCGGAGAG
- Length
- 21 nucleotides
- Bulged bases
- 11HV|1|28|C|4757, 11HV|1|28|U|4758, 11HV|1|28|A|4764, 11HV|1|28|G|4870, 11HV|1|28|C|4871, 11HV|1|28|G|4873, 11HV|1|28|A|4876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11HV|1|28|C|4756
11HV|1|28|C|4757
11HV|1|28|U|4758
11HV|1|28|C|4759
11HV|1|28|G|4760
11HV|1|28|G|4761
11HV|1|28|A|4762
11HV|1|28|U|4763
11HV|1|28|A|4764
11HV|1|28|G|4765
11HV|1|28|C|4766
*
11HV|1|28|G|4868
11HV|1|28|U|4869
11HV|1|28|G|4870
11HV|1|28|C|4871
11HV|1|28|G|4872
11HV|1|28|G|4873
11HV|1|28|A|4874
11HV|1|28|G|4875
11HV|1|28|A|4876
11HV|1|28|G|4877
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 14
- 60S ribosomal protein L14
- Chain 20
- Large ribosomal subunit protein eL20
- Chain L6
- Large ribosomal subunit protein eL6
- Chain L9
- 60S ribosomal protein L9
- Chain bb
- Large ribosomal subunit protein uL13
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