IL_11IQ_013
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUGAC*GGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_013 not in the Motif Atlas
- Geometric match to IL_4V9F_085
- Geometric discrepancy: 0.235
- The information below is about IL_4V9F_085
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
11IQ|1|18|C|188
11IQ|1|18|U|189
11IQ|1|18|G|190
11IQ|1|18|A|191
11IQ|1|18|C|192
*
11IQ|1|18|G|207
11IQ|1|18|G|208
11IQ|1|18|A|209
11IQ|1|18|U|210
11IQ|1|18|G|211
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain S8
- 40S ribosomal protein S8
Coloring options: