IL_11IQ_014

3D structure

PDB id

11IQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,eIF5A and SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

11IQ|1|18|U|305, 11IQ|1|18|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11IQ|1|18|C|216
11IQ|1|18|A|217
11IQ|1|18|U|218
11IQ|1|18|U|219
*
11IQ|1|18|A|302
11IQ|1|18|C|303
11IQ|1|18|C|304
11IQ|1|18|U|305
11IQ|1|18|C|306
11IQ|1|18|G|307
11IQ|1|18|G|308
11IQ|1|18|G|309

Current chains

Chain 18

18S rRNA

Nearby chains

Chain S4

40S ribosomal protein S4

Chain S8

40S ribosomal protein S8