3D structure

PDB id
11IQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 80S with eEF2,eIF5A and SERBP1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GACAGGA*UUC
Length
10 nucleotides
Bulged bases
11IQ|1|18|G|1285
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

11IQ|1|18|G|1281
11IQ|1|18|A|1282
11IQ|1|18|C|1283
11IQ|1|18|A|1284
11IQ|1|18|G|1285
11IQ|1|18|G|1286
11IQ|1|18|A|1287
*
11IQ|1|18|U|1314
11IQ|1|18|U|1315
11IQ|1|18|C|1316

Current chains

Chain 18
18S rRNA

Nearby chains

Chain CC
40S ribosomal protein S10
Chain EE
40S ribosomal protein S12
Chain ZZ
40S ribosomal protein S27a

Coloring options:

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