IL_11IQ_156
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UUAAG*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 11IQ|1|28|U|2070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_156 not in the Motif Atlas
- Homologous match to IL_8GLP_075
- Geometric discrepancy: 0.0777
- The information below is about IL_8GLP_075
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.3
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
11IQ|1|28|U|1905
11IQ|1|28|U|1906
11IQ|1|28|A|1907
11IQ|1|28|A|1908
11IQ|1|28|G|1909
*
11IQ|1|28|C|2067
11IQ|1|28|C|2068
11IQ|1|28|A|2069
11IQ|1|28|U|2070
11IQ|1|28|A|2071
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 32
- Large ribosomal subunit protein eL32
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain L7
- 60S ribosomal protein L7
- Chain Q
- Large ribosomal subunit protein eL18
- Chain ee
- Large ribosomal subunit protein eL33
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