IL_11IQ_210
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_210 not in the Motif Atlas
- Homologous match to IL_9AXU_094
- Geometric discrepancy: 0.1199
- The information below is about IL_9AXU_094
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
11IQ|1|28|U|4295
11IQ|1|28|U|4296
11IQ|1|28|G|4297
11IQ|1|28|A|4298
*
11IQ|1|28|U|4312
11IQ|1|28|A|4313
11IQ|1|28|C|4314
11IQ|1|28|A|4315
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 21
- 60S ribosomal protein L21
- Chain 29
- Large ribosomal subunit protein eL29
- Chain 42
- eL42
- Chain L5
- 60S ribosomal protein L5
- Chain Q
- Large ribosomal subunit protein eL18
Coloring options: