IL_11IQ_232
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAUUAU*AGAAUC
- Length
- 12 nucleotides
- Bulged bases
- 11IQ|1|28|A|4708
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_232 not in the Motif Atlas
- Homologous match to IL_8GLP_164
- Geometric discrepancy: 0.0363
- The information below is about IL_8GLP_164
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
11IQ|1|28|G|4680
11IQ|1|28|A|4681
11IQ|1|28|U|4682
11IQ|1|28|U|4683
11IQ|1|28|A|4684
11IQ|1|28|U|4685
*
11IQ|1|28|A|4705
11IQ|1|28|G|4706
11IQ|1|28|A|4707
11IQ|1|28|A|4708
11IQ|1|28|U|4709
11IQ|1|28|C|4710
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 40
- Large ribosomal subunit protein eL40
- Chain L9
- 60S ribosomal protein L9
- Chain bb
- Large ribosomal subunit protein uL13
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