3D structure

PDB id
11JJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGGCG*CCCG
Length
9 nucleotides
Bulged bases
11JJ|1|18|C|753
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

11JJ|1|18|C|750
11JJ|1|18|G|751
11JJ|1|18|G|752
11JJ|1|18|C|753
11JJ|1|18|G|754
*
11JJ|1|18|C|790
11JJ|1|18|C|791
11JJ|1|18|C|792
11JJ|1|18|G|793

Current chains

Chain 18
18S rRNA

Nearby chains

Chain S6
40S ribosomal protein S6

Coloring options:

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