IL_11JJ_057
3D structure
- PDB id
- 11JJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGACAGGAUUGACAG*CUUUCUCGAUUCC
- Length
- 28 nucleotides
- Bulged bases
- 11JJ|1|18|G|1285, 11JJ|1|18|U|1315
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11JJ|1|18|G|1280
11JJ|1|18|G|1281
11JJ|1|18|A|1282
11JJ|1|18|C|1283
11JJ|1|18|A|1284
11JJ|1|18|G|1285
11JJ|1|18|G|1286
11JJ|1|18|A|1287
11JJ|1|18|U|1288
11JJ|1|18|U|1289
11JJ|1|18|G|1290
11JJ|1|18|A|1291
11JJ|1|18|C|1292
11JJ|1|18|A|1293
11JJ|1|18|G|1294
*
11JJ|1|18|C|1305
11JJ|1|18|U|1306
11JJ|1|18|U|1307
11JJ|1|18|U|1308
11JJ|1|18|C|1309
11JJ|1|18|U|1310
11JJ|1|18|C|1311
11JJ|1|18|G|1312
11JJ|1|18|A|1313
11JJ|1|18|U|1314
11JJ|1|18|U|1315
11JJ|1|18|C|1316
11JJ|1|18|C|1317
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain A
- Small ribosomal subunit protein uS19
- Chain CC
- 40S ribosomal protein S10
- Chain EE
- 40S ribosomal protein S12
- Chain XX
- 40S ribosomal protein S29
- Chain ZZ
- 40S ribosomal protein S27a
Coloring options: