IL_11JJ_118
3D structure
- PDB id
- 11JJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AAGG*CAGCAGCAGCU
- Length
- 15 nucleotides
- Bulged bases
- 11JJ|1|28|A|932, 11JJ|1|28|G|933, 11JJ|1|28|A|935, 11JJ|1|28|C|936
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11JJ|1|28|A|732
11JJ|1|28|A|733
11JJ|1|28|G|734
11JJ|1|28|G|735
*
11JJ|1|28|C|928
11JJ|1|28|A|929
11JJ|1|28|G|930
11JJ|1|28|C|931
11JJ|1|28|A|932
11JJ|1|28|G|933
11JJ|1|28|C|934
11JJ|1|28|A|935
11JJ|1|28|G|935|||A
11JJ|1|28|C|936
11JJ|1|28|U|937
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 14
- 60S ribosomal protein L14
- Chain 20
- Large ribosomal subunit protein eL20
- Chain L4
- 60S ribosomal protein L4
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