IL_11JJ_234

3D structure

PDB id

11JJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

11JJ|1|28|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11JJ|1|28|G|4890
11JJ|1|28|G|4891
11JJ|1|28|A|4892
11JJ|1|28|A|4893
11JJ|1|28|A|4894
11JJ|1|28|C|4895
11JJ|1|28|G|4896
*
11JJ|1|28|C|4924
11JJ|1|28|U|4925
11JJ|1|28|C|4926
11JJ|1|28|G|4927
11JJ|1|28|C|4928
11JJ|1|28|C|4929

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 14

60S ribosomal protein L14

Chain L6

60S ribosomal protein L6

Chain bb

Large ribosomal subunit protein uL13