IL_11KH_026
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_026 not in the Motif Atlas
- Homologous match to IL_9PN5_168
- Geometric discrepancy: 0.1638
- The information below is about IL_9PN5_168
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02511.3
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
11KH|1|18|G|563
11KH|1|18|A|564
11KH|1|18|G|565
*
11KH|1|18|C|585
11KH|1|18|G|586
11KH|1|18|A|587
11KH|1|18|G|588
11KH|1|18|G|589
11KH|1|18|A|590
11KH|1|18|U|591
11KH|1|18|C|592
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain S9
- 40S ribosomal protein S9
- Chain YY
- 40S ribosomal protein S30
Coloring options: