IL_11KH_054
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAC*GUAC
- Length
- 7 nucleotides
- Bulged bases
- 11KH|1|18|A|1695
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_054 not in the Motif Atlas
- Geometric match to IL_4V9F_097
- Geometric discrepancy: 0.284
- The information below is about IL_4V9F_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_30722.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 20
Unit IDs
11KH|1|18|G|1203
11KH|1|18|A|1204
11KH|1|18|C|1205
*
11KH|1|18|G|1693
11KH|1|18|U|1694
11KH|1|18|A|1695
11KH|1|18|C|1696
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain IF
- IFRD2
- Chain LA
- La-related protein 1
- Chain S2
- 40S ribosomal protein S2
- Chain UU
- eS26
Coloring options: