IL_30722.1

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name for chain		1		2		3	break		4		5		6	1-6	2-5	3-4
1	IL_9AXU_133	9AXU	0.5689	1	Isolated non-canonical cWW pair (H)	4	5.8S rRNA	U	72	A	73	A	74	*	U	101	C	102	A	104	cWW	ncWW	ncWW
2	IL_8OI5_141	8OI5	0.5533	1		4	5.8S rRNA	U	64	A	65	A	66	*	U	93	C	94	A	96	cWW	ncWW	ncWW
3	IL_9PN5_140	9PN5	0.5386	1		A4	5.8S rRNA	U	64	A	65	A	66	*	U	93	C	94	A	96	cWW	ncWS	cWW
4	IL_8GLP_187	8GLP	0.4538	1	Isolated non-canonical cWW pair (H)	L8	5.8S rRNA	U	64	A	65	A	66	*	U	92	C	93	A	95	cWW	ncWW	cWW
5	IL_7A0S_112	7A0S	0.3960	1	Isolated non-canonical cWW with bulges	Y	5S rRNA	C	19	A	20	C	21	*	G	66	C	67	G	69	ncWW	ncWW	ncWW
6	IL_4V9F_097	4V9F	0.3418	1	Isolated non-canonical cWW with bulges	0	LSU rRNA	G	2855	A	2856	C	2857	*	G	2900	C	2901	C	2903	cWW	ncWW	cWW
7	IL_9NLN_007	9NLN	0.3018	1		C	RNA (CVB3 IRES Domain V)	C	41	A	42	C	43	*	G	59	C	60	G	62	cWW	cWW	cWW
8	IL_5ML7_010	5ML7	0.3398	1	Isolated non-canonical cWW with bulges	B	23S ribosomal RNA	U	2181	A	2182	C	2183	*	G	2196	C	2197	A	2199	cWW	cWW	cWW
9	IL_4PKD_001	4PKD	0.1717	1	Isolated non-canonical cWW with bulges	V	U1 snRNA stem-loops 1 and 2 (55-MER)	G	106	U	107	U	108	*	A	86	U	87	C	89	cWW	cWw	cWW
10	IL_7A0S_089	7A0S	0.1343	2	Isolated non-canonical cWW with bulges	X	LSU rRNA	C	2489	U	2490	C	2491	*	G	2553	C	2554	G	2557	cWW		cWW
11	IL_4WF9_095	4WF9	0.0886	2	Isolated non-canonical cWW with bulges	X	LSU rRNA	C	2537	U	2538	C	2539	*	G	2601	C	2602	G	2605	cWW	ncWW	cWW
12	IL_8B0X_155	8B0X	0.0000	2		a	LSU rRNA	C	2514	U	2515	C	2516	*	G	2578	C	2579	G	2582	cWW	ncWW	cWW
13	IL_9DFE_097	9DFE	0.1123	2	Isolated non-canonical cWW with bulges	1A	LSU rRNA	C	2510	U	2511	C	2512	*	G	2574	C	2575	G	2578	cWW	ncWW	cWW
14	IL_9E6Q_089	9E6Q	0.1564	2	Isolated non-canonical cWW with bulges (H)	1	LSU rRNA	OMC	2624	PSU	2625	C	2626	*	G	2688	U	2689	G	2692	cWW	cWw	cWW
15	IL_9AXU_099	9AXU	0.1928	2	Isolated non-canonical cWW with bulges (H)	2	LSU rRNA	C	2974	U	2975	C	2976	*	G	3038	U	3039	G	3042	cWW	cWw	cWW
16	IL_8OI5_108	8OI5	0.2086	2		1	LSU rRNA	C	2851	U	2852	C	2853	*	G	2915	U	2916	G	2919	cWW	cWw	cWW
17	IL_9PN5_103	9PN5	0.2091	2		A1	LSU rRNA	C	2879	PSU	2880	C	2881	*	G	2943	PSU	2944	G	2947	cWW	cWw	cWW
18	IL_9H3G_122	9H3G	0.1979	2		A	LSU rRNA	OMC	2878	PSU	2879	C	2880	*	G	2942	PSU	2943	G	2946	cWW	cWw	cWW
19	IL_4V9F_087	4V9F	0.2089	2	Isolated non-canonical cWW with bulges	0	LSU rRNA	U	2545	U	2546	C	2547	*	G	2609	U	2610	G	2613	cWW	cWw	cWW
20	IL_8GLP_314	8GLP	0.5234	2		L5	LSU rRNA	OMC	4456	PSU	4457	C	4458	*	G	4520	PSU	4521	G	4524	cWW	cWw	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
UAA*UCGA	4
CUC*GCGAG	4
CAC*GCAG	2
CUC*GUGAG	2
(OMC)(PSU)C*G(PSU)G(A2M)G	2
GAC*GCAC	1
UAC*GCCA	1
GUU*AUAC	1
(OMC)(PSU)C*GUG(A2M)G	1
C(PSU)C*G(PSU)GAG	1
UUC*GUGAG	1

Non-Watson-Crick part of the motif

Sequence	Counts
A*CG	4
U*CGA	4
A*CA	3
U*UGA	3
(PSU)*(PSU)G(A2M)	2
A*CC	1
U*UA	1
(PSU)*UG(A2M)	1
(PSU)*(PSU)GA	1

Release history

Release	4.10
Date	2026-05-20
Status	New id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Motif IL_30722.1 Version IL_30722.1 of this group appears in releases 4.10 to 4.10 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_30722.1 Version IL_30722.1 of this group appears in releases 4.10 to 4.10

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Csv

Json