IL_11KH_179
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AACAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_179 not in the Motif Atlas
- Homologous match to IL_9H3G_083
- Geometric discrepancy: 0.1064
- The information below is about IL_9H3G_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.3
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 8
Unit IDs
11KH|1|28|A|2832
11KH|1|28|A|2833
11KH|1|28|C|2834
11KH|1|28|A|2835
11KH|1|28|A|2836
11KH|1|28|U|2837
11KH|1|28|G|2838
*
11KH|1|28|C|3850
11KH|1|28|U|3851
11KH|1|28|A|3852
11KH|1|28|U|3853
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 17
- 60S ribosomal protein L17
- Chain 31
- 60S ribosomal protein L31
- Chain L3
- 60S ribosomal protein L3
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