IL_11KH_193
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- (PSU)CAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_193 not in the Motif Atlas
- Homologous match to IL_9H3G_097
- Geometric discrepancy: 0.1496
- The information below is about IL_9H3G_097
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65359.3
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
11KH|1|28|PSU|3715
11KH|1|28|C|3716
11KH|1|28|A|3717
11KH|1|28|A|3718
11KH|1|28|A|3719
11KH|1|28|G|3720
11KH|1|28|U|3721
*
11KH|1|28|A|3732
11KH|1|28|A|3733
11KH|1|28|U|3734
11KH|1|28|G|3735
11KH|1|28|A|3736
11KH|1|28|A|3737
11KH|1|28|G|3738
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 36
- 60S ribosomal protein L36
- Chain 42
- eL42
- Chain L8
- 60S ribosomal protein L8
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