IL_11KH_225
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 11KH|1|28|U|4634, 11KH|1|28|U|4636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_225 not in the Motif Atlas
- Homologous match to IL_8GLP_318
- Geometric discrepancy: 0.2204
- The information below is about IL_8GLP_318
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_43276.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
11KH|1|28|U|4632
11KH|1|28|G|4633
11KH|1|28|U|4634
11KH|1|28|A|4635
11KH|1|28|U|4636
11KH|1|28|G|4637
*
11KH|1|28|C|4662
11KH|1|28|G|4663
11KH|1|28|A|4664
11KH|1|28|A|4665
11KH|1|28|G|4666
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 31
- 60S ribosomal protein L31
- Chain L3
- 60S ribosomal protein L3
- Chain W
- eL24
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