IL_1EHT_022

3D structure

PDB id

1EHT (explore in PDB, NAKB, or RNA 3D Hub)

Description

THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CCAG*CCCUUGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1EHT_022 not in the Motif Atlas

Geometric match to IL_8DK7_002

Geometric discrepancy: 0.3535

The information below is about IL_8DK7_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_72249.1

Basepair signature

cWW-L-R-L-R-tWH-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

1EHT|2|A|C|8
1EHT|2|A|C|9
1EHT|2|A|A|10
1EHT|2|A|G|11
*
1EHT|2|A|C|20
1EHT|2|A|C|21
1EHT|2|A|C|22
1EHT|2|A|U|23
1EHT|2|A|U|24
1EHT|2|A|G|25
1EHT|2|A|G|26

Current chains

Chain A

THEOPHYLLINE-BINDING RNA

Nearby chains