IL_1ET4_001
3D structure
- PDB id
- 1ET4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CGCAUAAC*GCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Vitamin B12 Aptamer
- Broad Annotation
- No text annotation
- Motif group
- IL_95811.1
- Basepair signature
- cWW-L-cWW-L-cWW-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
1ET4|1|A|C|211
1ET4|1|A|G|212
1ET4|1|A|C|213
1ET4|1|A|A|214
1ET4|1|A|U|215
1ET4|1|A|A|216
1ET4|1|A|A|217
1ET4|1|A|C|218
*
1ET4|1|A|G|228
1ET4|1|A|C|229
1ET4|1|A|G|230
Current chains
- Chain A
- RNA APTAMER, 35-MER
Nearby chains
- Chain B
- RNA APTAMER, 35-MER
Coloring options: