1ET4 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1ET4_001 | 1/A/219:226 | No text annotation HL_86769.4 | ||
| HL_1ET4_002 | 1/B/319:326 | No text annotation | geometric HL_1ET4_001 HL_86769.4 | |
| HL_1ET4_003 | 1/C/419:426 | No text annotation | geometric HL_1ET4_001 HL_86769.4 | |
| HL_1ET4_004 | 1/D/519:526 | No text annotation | geometric HL_1ET4_001 HL_86769.4 | |
| HL_1ET4_005 | 1/E/119:126 | No text annotation | geometric HL_1ET4_001 HL_86769.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1ET4_001 | 1/A/211:218, 1/A/228:230 | Vitamin B12 Aptamer IL_95811.1 | ||
| IL_1ET4_002 | 1/A/218:219, 1/A/226:228 | Major groove intercalation IL_89505.4 | ||
| IL_1ET4_003 | 1/B/311:318, 1/B/328:330 | Vitamin B12 Aptamer | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1ET4_011 | 1/B/311:319, 1/B/326:330 | No text annotation | ||
| IL_1ET4_004 | 1/B/318:319, 1/B/326:328 | Major groove intercalation | geometric IL_1ET4_002 IL_89505.4 | |
| IL_1ET4_005 | 1/C/411:418, 1/C/428:430 | Vitamin B12 Aptamer | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1ET4_006 | 1/C/418:419, 1/C/426:428 | Multiple bulged bases | geometric IL_5WTK_001 IL_82107.4 | |
| IL_1ET4_007 | 1/D/511:518, 1/D/528:530 | Vitamin B12 Aptamer | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1ET4_012 | 1/D/511:519, 1/D/526:530 | No text annotation | ||
| IL_1ET4_008 | 1/D/518:519, 1/D/526:528 | Major groove intercalation | geometric IL_1ET4_002 IL_89505.4 | |
| IL_1ET4_009 | 1/E/111:118, 1/E/128:130 | Vitamin B12 Aptamer | geometric IL_1ET4_001 IL_95811.1 | |
| IL_1ET4_013 | 1/E/111:119, 1/E/126:130 | No text annotation | ||
| IL_1ET4_010 | 1/E/118:119, 1/E/126:128 | Multiple bulged bases | geometric IL_5WTK_001 IL_82107.4 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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