IL_1ET4_005
3D structure
- PDB id
- 1ET4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CGCAUAAC*GCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24476.1
- Basepair signature
- 11_cWW----cWW--bif-cWW
- Number of instances in this motif group
- 5
Unit IDs
1ET4|1|C|C|411
1ET4|1|C|G|412
1ET4|1|C|C|413
1ET4|1|C|A|414
1ET4|1|C|U|415
1ET4|1|C|A|416
1ET4|1|C|A|417
1ET4|1|C|C|418
*
1ET4|1|C|G|428
1ET4|1|C|C|429
1ET4|1|C|G|430
Current chains
- Chain C
- RNA APTAMER, 35-MER
Nearby chains
- Chain D
- RNA APTAMER, 35-MER
- Chain E
- RNA APTAMER, 35-MER
Coloring options: