IL_1FFK_089
3D structure
- PDB id
- 1FFK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CCACU*ACG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1FFK_089 not in the Motif Atlas
- Homologous match to IL_4V9F_093
- Geometric discrepancy: 0.0566
- The information below is about IL_4V9F_093
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
1FFK|1|0|C|2717
1FFK|1|0|C|2718
1FFK|1|0|A|2719
1FFK|1|0|C|2720
1FFK|1|0|U|2721
*
1FFK|1|0|A|2761
1FFK|1|0|C|2762
1FFK|1|0|G|2763
Current chains
- Chain 0
- 23S RRNA
Nearby chains
- Chain B
- RIBOSOMAL PROTEIN L3
- Chain H
- RIBOSOMAL PROTEIN L14
- Chain R
- RIBOSOMAL PROTEIN L24E
Coloring options: