IL_1FFZ_002

3D structure

PDB id

1FFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH R(CC)-DA-PUROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AAG*CUAU

Length

7 nucleotides

Bulged bases

1FFZ|1|A|A|2096, 1FFZ|1|A|U|2648, 1FFZ|1|A|A|2649

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1FFZ_002 not in the Motif Atlas

Homologous match to IL_4V9F_073

Geometric discrepancy: 0.2232

The information below is about IL_4V9F_073

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

1FFZ|1|A|A|2095
1FFZ|1|A|A|2096
1FFZ|1|A|G|2097
*
1FFZ|1|A|C|2647
1FFZ|1|A|U|2648
1FFZ|1|A|A|2649
1FFZ|1|A|U|2650

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains