IL_1FJG_011

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUCAG*CGACGACG

Length

14 nucleotides

Bulged bases

1FJG|1|A|U|244, 1FJG|1|A|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_43081.1

Basepair signature

cWW-tWH-cWW-tHS-tSS-tSS-R-cWW

Number of instances in this motif group

2

Unit IDs

1FJG|1|A|C|242
1FJG|1|A|A|243
1FJG|1|A|U|244
1FJG|1|A|C|245
1FJG|1|A|A|246
1FJG|1|A|G|247
*
1FJG|1|A|C|277
1FJG|1|A|G|278
1FJG|1|A|A|279
1FJG|1|A|C|280
1FJG|1|A|G|281
1FJG|1|A|A|282
1FJG|1|A|C|283
1FJG|1|A|G|284

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain L

30S RIBOSOMAL PROTEIN S12

Chain Q

30S RIBOSOMAL PROTEIN S17