IL_1FJG_017

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

1FJG|1|A|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12789.1

Basepair signature

cWW-tSH-cWH-tWH-tSS-tHW-L-cWW

Number of instances in this motif group

2

Unit IDs

1FJG|1|A|G|409
1FJG|1|A|G|410
1FJG|1|A|A|411
1FJG|1|A|A|412
1FJG|1|A|G|413
1FJG|1|A|A|414
1FJG|1|A|A|415
1FJG|1|A|G|416
*
1FJG|1|A|U|427
1FJG|1|A|G|428
1FJG|1|A|U|429
1FJG|1|A|A|430
1FJG|1|A|A|431
1FJG|1|A|A|432
1FJG|1|A|C|433

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain D

30S RIBOSOMAL PROTEIN S4