IL_1FJG_022

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

1FJG|1|A|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48256.2

Basepair signature

cWW-cWW

Number of instances in this motif group

371

Unit IDs

1FJG|1|A|C|569
1FJG|1|A|G|570
1FJG|1|A|U|571
1FJG|1|A|A|572
1FJG|1|A|A|573
1FJG|1|A|A|574
1FJG|1|A|G|575
*
1FJG|1|A|C|880
1FJG|1|A|G|881

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain E

30S RIBOSOMAL PROTEIN S5

Chain L

30S RIBOSOMAL PROTEIN S12

Chain Q

30S RIBOSOMAL PROTEIN S17