IL_1FJG_029

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAGAG*UGGU

Length

9 nucleotides

Bulged bases

1FJG|1|A|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

116

Unit IDs

1FJG|1|A|G|662
1FJG|1|A|A|663
1FJG|1|A|G|664
1FJG|1|A|A|665
1FJG|1|A|G|666
*
1FJG|1|A|U|740
1FJG|1|A|G|741
1FJG|1|A|G|742
1FJG|1|A|U|743

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain F

30S RIBOSOMAL PROTEIN S6

Chain O

30S RIBOSOMAL PROTEIN S15

Chain R

30S RIBOSOMAL PROTEIN S18