IL_1FKA_006
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1FKA_006 not in the Motif Atlas
- Geometric match to IL_7A0S_026
- Geometric discrepancy: 0.1437
- The information below is about IL_7A0S_026
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
1FKA|1|A|G|77
1FKA|1|A|G|78
1FKA|1|A|G|79
*
1FKA|1|A|C|85
1FKA|1|A|U|86
1FKA|1|A|C|87
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: