IL_1FKA_086
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1FKA_086 not in the Motif Atlas
- Homologous match to IL_6CZR_408
- Geometric discrepancy: 0.3638
- The information below is about IL_6CZR_408
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
1FKA|1|A|U|589
1FKA|1|A|G|590
1FKA|1|A|A|591
1FKA|1|A|A|592
1FKA|1|A|A|593
1FKA|1|A|G|594
1FKA|1|A|A|595
1FKA|1|A|C|596
*
1FKA|1|A|G|612
1FKA|1|A|G|613
1FKA|1|A|G|614
1FKA|1|A|G|615
1FKA|1|A|A|616
1FKA|1|A|G|617
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain D
- 30S RIBOSOMAL PROTEIN S4
- Chain H
- 30S RIBOSOMAL PROTEIN S8
- Chain P
- 30S RIBOSOMAL PROTEIN S16
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