IL_1G1X_001

3D structure

PDB id

1G1X (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GA*UGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Major groove platform; stack outside cWW

Broad Annotation

Major groove platform

Motif group

IL_50694.3

Basepair signature

cWW-tSH-cWW-L

Number of instances in this motif group

27

Unit IDs

1G1X|1|D|G|654
1G1X|1|D|A|655
*
1G1X|1|E|U|751
1G1X|1|E|G|752
1G1X|1|E|A|753
1G1X|1|E|C|754

Current chains

Chain D

16S RIBOSOMAL RNA

Chain E

16S RIBOSOMAL RNA

Nearby chains

Chain B

30S RIBOSOMAL PROTEIN S15

Chain F

30S RIBOSOMAL PROTEIN S6