1G1X Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1G1X_001 | 1/D/590:649 | GNRA | ||
| HL_1G1X_003 | 1/E/726:731 | GNRA | ||
| HL_1G1X_004 | 1/I/590:649 | GNRA | ||
| HL_1G1X_005 | 1/J/726:731 | GNRA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1G1X_001 | 1/D/654:655, 1/E/751:754 | Major groove platform; stack outside cWW | ||
| IL_1G1X_002 | 1/D/657:658, 1/E/747:749 | Major groove platform | ||
| IL_1G1X_003 | 1/D/662:666, 1/E/740:743 | Tandem non-canonical cWW pairs | ||
| IL_1G1X_004 | 1/I/654:655, 1/J/751:754 | Major groove platform; stack outside cWW | ||
| IL_1G1X_005 | 1/I/657:658, 1/J/747:749 | Major groove platform | ||
| IL_1G1X_006 | 1/I/662:666, 1/J/740:743 | Tandem non-canonical cWW pairs |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_1G1X_001 | 1/D/586:588, 1/D/651:654, 1/E/754:755 | No text annotation | geometric J3_5J7L_002 NA | |
| J3_1G1X_005 | 1/D/586:588, 1/D/651:655, 1/E/751:755 | No text annotation | geometric J3_5J7L_051 NA | |
| J3_1G1X_002 | 1/D/672:673, 1/E/717:725, 1/E/732:734 | No text annotation | geometric J3_1G1X_004 NA | |
| J3_1G1X_003 | 1/I/586:589, 1/I/650:654, 1/J/754:755 | No text annotation | ||
| J3_1G1X_006 | 1/I/586:589, 1/I/650:655, 1/J/751:755 | No text annotation | ||
| J3_1G1X_004 | 1/I/672:673, 1/J/717:725, 1/J/732:734 | No text annotation | geometric J3_1G1X_002 NA |
Problematic loops
No problematic loops
Coloring options: