IL_1GID_003

3D structure

PDB id

1GID (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GAAAG*UAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31555.8

Basepair signature

cWW-R-tSH-tHS-cWW

Number of instances in this motif group

15

Unit IDs

1GID|1|A|G|112
1GID|1|A|A|113
1GID|1|A|A|114
1GID|1|A|A|115
1GID|1|A|G|116
*
1GID|1|A|U|205
1GID|1|A|A|206
1GID|1|A|A|207
1GID|1|A|C|208

Current chains

Chain A

P4-P6 RNA RIBOZYME DOMAIN

Nearby chains