IL_1GID_006

3D structure

PDB id

1GID (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GUA*UAAUAAGC

Length

11 nucleotides

Bulged bases

1GID|1|A|U|185

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04238.1

Basepair signature

cWW-cWH-cWW

Number of instances in this motif group

5

Unit IDs

1GID|1|A|G|134
1GID|1|A|U|135
1GID|1|A|A|136
*
1GID|1|A|U|182
1GID|1|A|A|183
1GID|1|A|A|184
1GID|1|A|U|185
1GID|1|A|A|186
1GID|1|A|A|187
1GID|1|A|G|188
1GID|1|A|C|189

Current chains

Chain A

P4-P6 RNA RIBOZYME DOMAIN

Nearby chains