3D structure

PDB id
1HC8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GUAG*CAUC
Length
8 nucleotides
Bulged bases
1HC8|1|C|A|111
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_23544.1
Basepair signature
cWW-L-R-R-cWW
Number of instances in this motif group
5

Unit IDs

1HC8|1|C|G|109
1HC8|1|C|U|110
1HC8|1|C|A|111
1HC8|1|C|G|112
*
1HC8|1|C|C|126
1HC8|1|C|A|127
1HC8|1|C|U|128
1HC8|1|C|C|129

Current chains

Chain C
58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN

Nearby chains

Chain A
RIBOSOMAL PROTEIN L11

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.092 s