IL_1HNZ_055

3D structure

PDB id

1HNZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAC*GG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HNZ_055 not in the Motif Atlas

Homologous match to IL_4LFB_054

Geometric discrepancy: 0.101

The information below is about IL_4LFB_054

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

1HNZ|1|A|C|1260
1HNZ|1|A|A|1261
1HNZ|1|A|C|1262
*
1HNZ|1|A|G|1273
1HNZ|1|A|G|1274

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain V

30S RIBOSOMAL PROTEIN THX