IL_1HR0_060

3D structure

PDB id

1HR0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUC*GGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HR0_060 not in the Motif Atlas

Homologous match to IL_4LFB_061

Geometric discrepancy: 0.1436

The information below is about IL_4LFB_061

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

1HR0|1|A|C|1424
1HR0|1|A|U|1425
1HR0|1|A|C|1426
*
1HR0|1|A|G|1474
1HR0|1|A|G|1475
1HR0|1|A|G|1476

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains