IL_1HR0_063

3D structure

PDB id

1HR0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGGGAG*CAG

Length

9 nucleotides

Bulged bases

1HR0|1|A|G|1443

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HR0_063 not in the Motif Atlas

Homologous match to IL_4LFB_064

Geometric discrepancy: 0.1768

The information below is about IL_4LFB_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49061.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

6

Unit IDs

1HR0|1|A|C|1440
1HR0|1|A|G|1441
1HR0|1|A|G|1442
1HR0|1|A|G|1443
1HR0|1|A|A|1446
1HR0|1|A|G|1447
*
1HR0|1|A|C|1459
1HR0|1|A|A|1460
1HR0|1|A|G|1461

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20