IL_1HR2_003

3D structure

PDB id

1HR2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.

Experimental method

X-RAY DIFFRACTION

Resolution

2.25 Å

Loop

Sequence

CAACAGC*GACAUG

Length

13 nucleotides

Bulged bases

1HR2|1|A|A|125, 1HR2|1|A|U|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HR2_003 not in the Motif Atlas

Geometric match to IL_2R8S_003

Geometric discrepancy: 0.0871

The information below is about IL_2R8S_003

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_68405.1

Basepair signature

cWW-cSS-L-tWH-tHW-cWW-cWW

Number of instances in this motif group

1

Unit IDs

1HR2|1|A|C|121
1HR2|1|A|A|122
1HR2|1|A|A|123
1HR2|1|A|C|124
1HR2|1|A|A|125
1HR2|1|A|G|126
1HR2|1|A|C|127
*
1HR2|1|A|G|195
1HR2|1|A|A|196
1HR2|1|A|C|197
1HR2|1|A|A|198
1HR2|1|A|U|199
1HR2|1|A|G|200

Current chains

Chain A

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN

Nearby chains