IL_1HR2_005

3D structure

PDB id

1HR2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.

Experimental method

X-RAY DIFFRACTION

Resolution

2.25 Å

Loop

Sequence

GUA*UAAUAAGC

Length

11 nucleotides

Bulged bases

1HR2|1|A|U|185

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HR2_005 not in the Motif Atlas

Geometric match to IL_2R8S_005

Geometric discrepancy: 0.1009

The information below is about IL_2R8S_005

Detailed Annotation

cWH basepair with bulged bases

Broad Annotation

cWH basepair with bulged bases

Motif group

IL_74957.1

Basepair signature

cWW-L-cHW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

1HR2|1|A|G|134
1HR2|1|A|U|135
1HR2|1|A|A|136
*
1HR2|1|A|U|182
1HR2|1|A|A|183
1HR2|1|A|A|184
1HR2|1|A|U|185
1HR2|1|A|A|186
1HR2|1|A|A|187
1HR2|1|A|G|188
1HR2|1|A|C|189

Current chains

Chain A

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN

Nearby chains