IL_2R8S_005
3D structure
- PDB id
- 2R8S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domain
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.95 Å
Loop
- Sequence
- GUA*UAAUAAGC
- Length
- 11 nucleotides
- Bulged bases
- 2R8S|1|R|U|185
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- cWH basepair with bulged bases
- Broad Annotation
- cWH basepair with bulged bases
- Motif group
- IL_36718.1
- Basepair signature
- cWW-cWH-cWW
- Number of instances in this motif group
- 7
Unit IDs
2R8S|1|R|G|134
2R8S|1|R|U|135
2R8S|1|R|A|136
*
2R8S|1|R|U|182
2R8S|1|R|A|183
2R8S|1|R|A|184
2R8S|1|R|U|185
2R8S|1|R|A|186
2R8S|1|R|A|187
2R8S|1|R|G|188
2R8S|1|R|C|189
Current chains
- Chain R
- P4-P6 RNA RIBOZYME DOMAIN
Nearby chains
- Chain H
- Fab heavy chain
Coloring options: