IL_1HR2_007

3D structure

PDB id

1HR2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.

Experimental method

X-RAY DIFFRACTION

Resolution

2.25 Å

Loop

Sequence

GAAUU*AGCC

Length

9 nucleotides

Bulged bases

1HR2|1|B|U|106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HR2_007 not in the Motif Atlas

Geometric match to IL_5J7L_033

Geometric discrepancy: 0.3768

The information below is about IL_5J7L_033

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

1HR2|1|B|G|103
1HR2|1|B|A|104
1HR2|1|B|A|105
1HR2|1|B|U|106
1HR2|1|B|U|107
*
1HR2|1|B|A|214
1HR2|1|B|G|215
1HR2|1|B|C|216
1HR2|1|B|C|217

Current chains

Chain B

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN

Nearby chains

Chain A

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN