IL_85033.2

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)		1		2		3		4	break		5		6		7		8	1-8	2-7	3-6	4-5
1	IL_1KUQ_003	1KUQ	0.6017	1	Tandem non-canonical cWW pairs	B	U	39	G	40	G	41	U	42	*	G	26	A	27\|\|A	G	28\|\|A	G	30	cWW	cWw	ncWW	cWW
2	IL_1G1X_003	1G1X	0.4540	1	Tandem non-canonical cWW pairs	E+D	U	740	G	741	G	742	U	743	*	G	662	A	663	G	664	G	666	cWW	cWw	cWW	cWW
3	IL_1G1X_006	1G1X	0.4465	1	Tandem non-canonical cWW pairs	J+I	U	740	G	741	G	742	U	743	*	G	662	A	663	G	664	G	666	cWW	cWw	cWW	cWW
4	IL_4LFB_029	4LFB	0.4310	1	Tandem non-canonical cWW pairs	A	U	740	G	741	G	742	U	743	*	G	662	A	663	G	664	G	666	cWW	cWw	cWW	cWW
5	IL_5J7L_033	5J7L	0.4278	1	Tandem non-canonical cWW pairs	AA	U	740	G	741	G	742	A	743	*	U	662	A	663	G	664	G	666	cWW	cWw	cWW	cWW
6	IL_8P9A_420	8P9A	0.4828	1	Tandem non-canonical cWW pairs (H)	sR	C	874	G	875	G	877	G	878	*	C	950	A	951	A	952	G	953	cWW	cWW	cWW	cWW
7	IL_8CRE_434	8CRE	0.4579	1	Tandem non-canonical cWW pairs (H)	CM	C	859	G	860	G	862	G	863	*	C	935	A	936	A	937	G	938	cWW	cWW	cWW	cWW
8	IL_8P9A_327	8P9A	0.3932	0	Tandem non-canonical cWW pairs (H)	AR	U	2735	A	2736	C	2737	A	2738	*	U	2718	U	2719	G	2720	A	2721	cWW	cWW		cWW
9	IL_8CRE_109	8CRE	0.3794	0	Tandem non-canonical cWW pairs (H)	1	U	2707	A	2708	C	2709	A	2710	*	U	2690	U	2691	G	2692	A	2693	cWW	cWW		cWW
10	IL_5J7L_283	5J7L	0.3601	0	Tandem non-canonical cWW pairs	DA	G	1038	A	1039	A	1040	G	1041	*	C	1114	G	1115	G	1116	C	1117	cWW	cWW	cWW	cWW
11	IL_7R9G_002	7R9G	0.3294	0	Tandem non-canonical cWW pairs	B	C	5	G	6	G	7	G	8	*	C	5\|\|\|\|2_555	G	6\|\|\|\|2_555	G	7\|\|\|\|2_555	G	8\|\|\|\|2_555	ncWW			ncWW
12	IL_8CRE_440	8CRE	0.3804	0	Tandem non-canonical cWW pairs (H)	CM	G	1059	C	1060	A	1061	C	1062	*	G	1026	G	1027	A	1028	U	1029	cWW	ncBW	cWW	cWW
13	IL_8P9A_426	8P9A	0.4006	0	Tandem non-canonical cWW pairs (H)	sR	G	1074	C	1075	A	1076	C	1077	*	G	1041	G	1042	A	1043	U	1044	cWW	ncBW	cWW	cWW
14	IL_333D_001	333D	0.3250	0	Tandem non-canonical cWW pairs	A	C	3	A	4	I	5	G	6	*	C	3\|\|\|\|11_655	A	4\|\|\|\|11_655	I	5\|\|\|\|11_655	G	6\|\|\|\|11_655	cWW	cWW	cWW	cWW
15	IL_5LQT_002	5LQT	0.3189	0	Tandem non-canonical cWW pairs	B+A	G	4	G	5	6MZ	6	C	7	*	G	4	G	5	6MZ	6	C	7	cWW	cWW	cWW	cWW
16	IL_5LQO_002	5LQO	0.3700	0	Tandem non-canonical cWW pairs	A+B	G	4	G	5	A	6	C	7	*	G	4	G	5	A	6	C	7	cWW	cWW	cWW	cWW
17	IL_3CJZ_001	3CJZ	0.3884	0	Tandem non-canonical cWW pairs	A+B	G	5	M2G	6	A	7	C	8	*	G	18	M2G	19	A	20	C	21	cWW	cWW	cWW	cWW
18	IL_8P9A_419	8P9A	0.2852	0	Tandem non-canonical cWW pairs (H)	sR	G	953	G	954	A	955	C	956	*	G	871	G	872	U	873	C	874	cWW		cWW	cWW
19	IL_8CRE_433	8CRE	0.2961	0	Tandem non-canonical cWW pairs (H)	CM	G	938	G	939	A	940	C	941	*	G	856	G	857	U	858	C	859	cWW		cWW	cWW
20	IL_8P9A_421	8P9A	0.4103	0	Tandem non-canonical cWW pairs (H)	sR	A	924	G	925	A	926	C	927	*	G	885	U	886	A	887	U	888	cWW	cWW		cWW
21	IL_8CRE_435	8CRE	0.4216	0	Tandem non-canonical cWW pairs (H)	CM	A	909	G	910	A	911	C	912	*	G	870	U	871	A	872	U	873	cWW	cWW		cWW
22	IL_4K27_001	4K27	0.2357	0	Tandem non-canonical cWW pairs	U	C	4	C	5	U	6	G	7	*	C	49	C	50	U	51	G	52	cWW	cWW	cWW	cWW
23	IL_1L9A_005	1L9A	0.2230	0	Tandem non-canonical cWW pairs	B	G	138	A	139	C	140	C	141	*	G	156	A	157	C	158	C	159	cWW	ncWW	ncWWa	cWW
24	IL_8FER_001	8FER	0.2383	0		AAA+BBB	G	7	SUR	8	SUR	9	C	10	*	G	7	SUR	8	SUR	9	C	10	cWW	cWw	cWw	cWW
25	IL_5EW4_002	5EW4	0.2176	0	Tandem non-canonical cWW pairs	B+A	C	8	C	9	C	10	G	11	*	C	14	C	15	C	16	G	17	cWW	ncBW	ncBW	cWW
26	IL_7VYX_002	7VYX	0.2629	0		C	C	13	U	14	U	15	C	16	*	G	50	G	51	U	52	G	53	ncWW	ncWw	ncWWa	cWW
27	IL_1MFQ_004	1MFQ	0.2090	0	Tandem non-canonical cWW pairs	A	G	156	A	157	C	158	C	159	*	G	138	A	139	C	140	C	141	cWW	ncWW	ncWW	cWW
28	IL_1D4R_003	1D4R	0.1887	0	Tandem non-canonical cWW pairs	A+B	G	22	A	23	C	24	C	25	*	G	4	A	5	C	6	C	7	cWW	cWW	cWW	cWW
29	IL_1JID_002	1JID	0.1645	0	Tandem non-canonical cWW pairs	B	G	138	A	139	C	140	C	141	*	G	156	A	157	C	158	C	159	cWW	cWW	cWW	cWW
30	IL_1D4R_001	1D4R	0.0000	0	Tandem non-canonical cWW pairs	A+B	G	4	A	5	C	6	C	7	*	G	22	A	23	C	24	C	25	cWW	cWW	cWWa	cWW
31	IL_3WBM_002	3WBM	0.1862	0	Tandem non-canonical cWW pairs	Y+X	G	14	A	15	C	16	U	17	*	A	10	C	11	C	12	C	13	cWW	ncWW	ncBW	cWW
32	IL_3WBM_003	3WBM	0.1753	0	Tandem non-canonical cWW pairs	X+Y	G	14	A	15	C	16	U	17	*	A	10	C	11	C	12	C	13	cWW	cWW	ncBW	cWW
33	IL_8CRE_018	8CRE	0.3052	0	Tandem non-canonical cWW pairs (H)	1	A	445	U	446	U	447	U	448	*	G	481	U	482	U	483	U	484	cWW	ncWw		cWW
34	IL_5UNE_005	5UNE	0.4161	0	tSH-tHW	B+A	G	21	C	22	A	23	C	24	*	G	21	C	22	A	23	C	24	cWW	ntWH	ncWS	cWW
35	IL_6JDV_002	6JDV	0.3020	0	Tandem non-canonical cWW pairs	B	A	63	C	64	C	65	G	66	*	C	35	C	36	U	37	U	38	cWW	cWW		cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GACC*GACC	5
UGGU*GAGAG	4
CGGGG*CAAG	2
UACA*UUGA	2
GCAC*GGAU	2
GGAC*GGUC	2
AGAC*GUAU	2
GACU*ACCC	2
UGGA*UAGAG	1
GAAG*CGGC	1
CGGG*CGGG	1
CA(I)G*CA(I)G	1
GG(6MZ)C*GG(6MZ)C	1
GGAC*GGAC	1
GAC*GAC	1
CCUG*CCUG	1
G(SUR)(SUR)C*G(SUR)(SUR)C	1
CCCG*CCCG	1
CUUC*GGUG	1
AUUU*GUUU	1
GCAC*GCAC	1
ACCG*CCUU	1

Non-Watson-Crick part of the motif

Sequence	Counts
GG*AGA	5
AC*AC	5
GGG*AA	2
AC*UG	2
CA*GA	2
GA*GU	2
GA*UA	2
AC*CC	2
AA*GG	1
GG*GG	1
A(I)*A(I)	1
G(6MZ)*G(6MZ)	1
GA*GA	1
(M2G)A*(M2G)A	1
CU*CU	1
(SUR)(SUR)*(SUR)(SUR)	1
CC*CC	1
UU*GU	1
UU*UU	1
CA*CA	1
CC*CU	1

Release history

Release	3.96	3.97	3.98
Date	2025-04-23	2025-05-21	2025-06-18
Status	Updated, 2 parents	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Motif IL_85033.2 Version IL_85033.2 of this group appears in releases 3.96 to 3.98 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_85033.2 Version IL_85033.2 of this group appears in releases 3.96 to 3.98

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