IL_1I94_048
3D structure
- PDB id
- 1I94 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUGC*GGCACUC
- Length
- 12 nucleotides
- Bulged bases
- 1I94|1|A|U|1107
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1I94_048 not in the Motif Atlas
- Geometric match to IL_4LFB_048
- Geometric discrepancy: 0.1968
- The information below is about IL_4LFB_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.1
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
1I94|1|A|G|1106
1I94|1|A|U|1107
1I94|1|A|U|1108
1I94|1|A|G|1109
1I94|1|A|C|1110
*
1I94|1|A|G|1125
1I94|1|A|G|1126
1I94|1|A|C|1127
1I94|1|A|A|1128
1I94|1|A|C|1129
1I94|1|A|U|1130
1I94|1|A|C|1131
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
Coloring options: