3D structure

PDB id
1I95 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
Experimental method
X-RAY DIFFRACTION
Resolution
4.5 Å

Loop

Sequence
UGAC*GG
Length
6 nucleotides
Bulged bases
1I95|1|A|G|123
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_1I95_007 not in the Motif Atlas
Homologous match to IL_4LFB_007
Geometric discrepancy: 0.1649
The information below is about IL_4LFB_007
Detailed Annotation
Minor groove platform
Broad Annotation
No text annotation
Motif group
IL_33761.2
Basepair signature
cWW-L-cWW
Number of instances in this motif group
3

Unit IDs

1I95|1|A|U|122
1I95|1|A|G|123
1I95|1|A|A|124
1I95|1|A|C|125
*
1I95|1|A|G|226
1I95|1|A|G|227

Current chains

Chain A
16S RRNA

Nearby chains

Chain P
30S RIBOSOMAL PROTEIN S16
Chain Q
30S RIBOSOMAL PROTEIN S17
Chain T
30S RIBOSOMAL PROTEIN S20

Coloring options:


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