Motif IL_92286.1 Version IL_92286.1 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_007 | 4LFB | 0.2927 | 1 | Multiple bulged bases | A | SSU rRNA | U | 129 | A | 130 | C | 131 | * | G | 231 | G | 232 | cWW | cWW |
| 2 | IL_9SUM_116 | 9SUM | 0.0000 | 0 | A | LSU rRNA | G | 3072 | C | 3073 | U | 3074 | * | A | 3168 | C | 3169 | cWW | cWW | |
| 3 | IL_9I0V_003 | 9I0V | 0.3309 | 0 | C | A SELEX-derived artificial RNA aptamer | G | 9 | A | 10 | G | 11 | * | C | 23 | C | 24 | cWW | cWW | |
| 4 | IL_8OI5_099 | 8OI5 | 0.6040 | 0 | Single bulged A (H) | 1 | LSU rRNA | C | 2597 | A | 2598 | C | 2599 | * | G | 2586 | G | 2587 | cWW | cWW |
| 5 | IL_8T29_003 | 8T29 | 0.7498 | 0 | Single bulged A | R | RNA (90-MER) | C | 54 | A | 55 | A | 56 | * | U | 65 | G | 66 | cWW | cWW |
| 6 | IL_4PWD_008 | 4PWD | 0.6730 | 0 | Single bulged A | T+P | RNA (27-mer) | A | 715 | A | 715|||A | A | 716 | * | DT | 812 | DT | 813 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAC*GG | 1 |
| GCU*AC | 1 |
| GAG*CC | 1 |
| CAC*GG | 1 |
| CAA*UG | 1 |
| AAA*TT | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A* | 4 |
| GA* | 1 |
| C* | 1 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Single bulged A (2)
- (2)
- Multiple bulged bases (1)
- Single bulged A (H) (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.29 | Avg 0.49 | Max 0.84
Coloring options: