IL_1I97_025
3D structure
- PDB id
- 1I97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.5 Å
Loop
- Sequence
- GGACG*CGGUAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1I97_025 not in the Motif Atlas
- Geometric match to IL_6CZR_130
- Geometric discrepancy: 0.2076
- The information below is about IL_6CZR_130
- Detailed Annotation
- 6x5 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_88269.3
- Basepair signature
- cWW-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
1I97|1|A|G|440
1I97|1|A|G|441
1I97|1|A|A|442
1I97|1|A|C|443
1I97|1|A|G|444
*
1I97|1|A|C|467
1I97|1|A|G|468
1I97|1|A|G|469
1I97|1|A|U|470
1I97|1|A|A|471
1I97|1|A|C|472
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain P
- 30S RIBOSOMAL PROTEIN S16
Coloring options: